Insertion junction: CLIP2.070136_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.070136
Chromosome:chromosome 8
Location:1120225
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g362682 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR
Cre08.g362700 SMM30 (1 of 8) 3.4.24.71 - Endothelin-converting enzyme 1 / ECE-1; S-adenosyl-L-methionine-dependent methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCATACAGTCATCCAATCAGAACGATGATGCATCCGTAGCCAGTCCAGA
Internal bar code:AATCATATAAAAGGTTATAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2469
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGCTGTTGCGTTGTGTTA
Suggested primer 2:CAGCAGGAACAGCAGTACGA