Insertion junction: CLIP2.070139_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.070139
Chromosome:chromosome 1
Location:1812234
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g010150 (1 of 3) IPR006073//IPR027417 - GTP binding domain // P-loop containing nucleoside triphosphate hydrolase 3'UTR
Cre01.g010201 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCAGTACCGTACGTCGCGAGCGTGAAGCTGCGCAACGCAAACTGCAAA
Internal bar code:CGTGGTACCGGCGGCGGGAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1432
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CGTACGCTAGTGGATGGGTC
Suggested primer 2:CCCCAGCAGTCTGACAAGAG