Insertion junction: CLIP2.070139_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.070139
Chromosome:chromosome 7
Location:2747690
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre07.g331300 AGP3 ADP-glucose pyrophosphorylase large subunit; (1 of 1) PF00132//PF00483 - Bacterial transferase hexapeptide (six repeats) (Hexapep) // Nucleotidyl transferase (NTP_transferase) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCTAGCCGCGTTCATGTGAAGACCGGGGAAGAGGACGGACTTTGTTGG
Internal bar code:AGCCGTTTTGTTTTTTCTGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:120
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ACACGCACCGCTTTCATTTC
Suggested primer 2:TGTGTGTAGAGGAGGGGAGG