Insertion junction: CLIP2.070140_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.070140
Chromosome:chromosome 7
Location:6020088
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre07.g354750 3'UTR
lncRNA_TCONS_00226179 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCATGACCTTGACACCAATGGTGAACTGGTAAAGTGTGACGGAGTGCGT
Internal bar code:GCGTGAGTCGTAGGTAAGTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:424
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CGACCGACCCTGAAGTTTGA
Suggested primer 2:CATTCTGCATGCTCGCTCAC