Insertion junction: CLIP2.070141_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.070141
Chromosome:chromosome 14
Location:1231398
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g615950 Soluble ABC-E class cytosolic protein; (1 of 2) K03235 - elongation factor 3 (EF3, TEF3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGAAGGCTGAGTGATCAGGAGCGGCGTCAGTGCGCGTGCATCGTTCG
Internal bar code:CCTGTCATCGAGCTTGGATTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:934
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCAGGGTATGGTGGTATC
Suggested primer 2:GCTCAGGCCATCAAGGAGTT