Insertion junction: CLIP2.070142_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.070142
Chromosome:chromosome 3
Location:6438818
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g193100 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGCATGAAAGCCGGAAAGCCTAGATCTCGATCTAATCGCGTCAATGGA
Internal bar code:GGTCGATGAAGTAGTGCTACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2196
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCCATGCATATTGTGTGG
Suggested primer 2:GAAAAGCGACCGGATGCATC