Insertion junction: CLIP2.070142_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.070142
Chromosome:chromosome 3
Location:6438827
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g193100 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCATGCACACCGCTTCTCCTCTCTGAAGAAGCTGTTCATGGTATTCATTT
Internal bar code:CATCGTGTGCAGCGGGGACTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3856
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GAAAAGCGACCGGATGCATC
Suggested primer 2:CGCCCATGCATATTGTGTGG