Insertion junction: CLIP2.070149_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.070149
Chromosome:chromosome 12
Location:2602486
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g506450 HFO19,HFO35 (1 of 33) K11254 - histone H4 (H4); Histone H4 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGCGAGAACAAGTACACCACCCAAACTGTGTGCACAATCAATATCCAC
Internal bar code:GAGAGAGCGCTGGATATGGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1693
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CCCACTTCCTCGTTCGTTCA
Suggested primer 2:TAGCTAGGATTGTCGCGCTG