Insertion junction: CLIP2.070150_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.070150
Chromosome:chromosome 7
Location:778595
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g317950 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGTAGTTTGACGACTGCGCAGTGAGCAGGGCTCAGGCTGGCTCAGGAG
Internal bar code:TGGTGATCGTGCCTTTCGGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2955
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:GGAAAGCCACAAAGCCACAG
Suggested primer 2:CACGTATTGCTTAACCGCGG