Insertion junction: CLIP2.070152_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.070152
Chromosome:chromosome 4
Location:2467959
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g221900 (1 of 9) IPR000210//IPR011042//IPR011333 - BTB/POZ domain // Six-bladed beta-propeller, TolB-like // POZ domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGGGTCGCCGGTACACCCGAGGTGCGAGCATGCTGCTTCAAGGAGTTA
Internal bar code:AGGATACTAACTTAGACCTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:144
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TCTCCAGTCTCTCCCCACTG
Suggested primer 2:CTCACAGGTAGGGCACACTG