Insertion junction: CLIP2.070156_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.070156
Chromosome:chromosome 13
Location:2376349
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g579200 S6K1 (1 of 1) K04688 - p70 ribosomal S6 kinase (RPS6KB); Ribosomal protein S6 kinase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTAGACAAATCGGCGTTATGTTCTTGCTGCGTATGTGTCCTGTGGAGAG
Internal bar code:ACGCTAGTAAGCGTTTGCATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:840
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TCATATGGGTCTGGGGCTGA
Suggested primer 2:TGCTGTTGGTTGTGCTGTTG