Insertion junction: CLIP2.070157_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.070157
Chromosome:chromosome 15
Location:830222
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g640400 CLR4,OPR98,NCC2 Nuclear Control of Chloroplast 2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGAGTAAGTCAGGGCCGCAGTGCCGCCCCTGGAGTTAAGGGCGATGGA
Internal bar code:GGTTCTGAGTTTCTTTATACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:5428
LEAP-Seq percent confirming:98.9247
LEAP-Seq n confirming:92
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:93

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCTCTCCAATCTCCATCC
Suggested primer 2:AGGTAACGATTGCTGCAGCT