Insertion junction: CLIP2.070165_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.070165
Chromosome:chromosome 1
Location:5946473
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g042300 SRR6 (1 of 1) IPR001190//IPR009003//IPR017448 - SRCR domain // Peptidase S1, PA clan // SRCR-like domain; Scavenger receptor cysteine rich (SRCR) protein outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGAGTTGTTAGTTTGTATACTTCCCTCACAAGTACATCGTATTGGAGT
Internal bar code:TTTTGTGCTTTATGAGCGTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1897
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CATCGTGCTGTAATGGCGTG
Suggested primer 2:TCTTTTGACGTCGATGGCGA