Insertion junction: CLIP2.070171_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.070171
Chromosome:chromosome 16
Location:880820
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g648000 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAGGTTGGGGAGTGGCGTGGGCTTGGTGTGTCCGTGACCAGTGATTGGG
Internal bar code:TTTATTGGTTAATCTGCCAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2437
LEAP-Seq percent confirming:87.8788
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGCGGTCAAAGTGTGGAC
Suggested primer 2:GTGGGCGTATGGGCGTATAA