Insertion junction: CLIP2.070178_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.070178
Chromosome:chromosome 13
Location:83937
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g562400 ABI3 ABI3/VP1 family transcription factor; (1 of 2) PTHR31140//PTHR31140:SF1 - FAMILY NOT NAMED // B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAGCGAGCTGAGGGCGTTTGCTTGGACTTTCGCTGACTTGGGATGAGGG
Internal bar code:GTATTTGTGGTGAGGGCCTTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:448
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCGTTTGGCCACTTTTAC
Suggested primer 2:GTCAGTCCAGACAGCAGCAG