Insertion junction: CLIP2.070184_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.070184
Chromosome:chromosome 9
Location:5704063
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g410450 ROC15,ROC74 Rhythm Of Chloroplast 15; (1 of 4) IPR001005//IPR006447//IPR009057//IPR017930 - SANT/Myb domain // Myb domain, plants // Homeodomain-like // Myb domain outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGAAATATCAGTGAATATAGGACGCCCAGTAATCGAACAAGGTGAGGTC
Internal bar code:GCTACAATTCTTTCGGCAACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1717
LEAP-Seq percent confirming:97.9381
LEAP-Seq n confirming:95
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:97

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGAGGTGTCGGCAGAAAT
Suggested primer 2:TGCGATGGTTGTTGTTGCTG