Insertion junction: CLIP2.070190_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.070190
Chromosome:chromosome 16
Location:3607014
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g672041 (1 of 1) 2.1.1.228 - tRNA (guanine(37)-N(1))-methyltransferase / tRNA-(N(1)G37) methyltransferase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATCTGCAGGTTTTAACTATCAATTTCAATGCATGCGCTATGCAGCTTT
Internal bar code:TATGCTCACGATACGTCGATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:534
LEAP-Seq percent confirming:1.51515
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:65
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:GTACCCACACATCCACCCTG
Suggested primer 2:TCCATACCAACAGCGCCATT