Insertion junction: CLIP2.070190_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.070190
Chromosome:chromosome 16
Location:3607018
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g672041 (1 of 1) 2.1.1.228 - tRNA (guanine(37)-N(1))-methyltransferase / tRNA-(N(1)G37) methyltransferase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATCTAGGGACGGTAAACCAATACCTAGTTTTTCAGCTGCTCTTTCAGT
Internal bar code:TATGCTCACGATACGTCGATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:633
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TCCATACCAACAGCGCCATT
Suggested primer 2:GTACCCACACATCCACCCTG