Insertion junction: CLIP2.070193_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.070193
Chromosome:chromosome 11
Location:3075582
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g475000 IFT121,IFT122B,FAP118 Intraflagellar Transport Protein 121; (1 of 1) PTHR16517:SF1 - WD REPEAT-CONTAINING PROTEIN 35 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTACCTCATCTTCTTGTGCCCCTAGCCTCGAGCTTCAGGTGAGCGATACC
Internal bar code:GTAAGTCGCTTTCACTATGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2417
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CACCTGTCCATCACACACGA
Suggested primer 2:GGACCCCATGCCACAAAAAC