Insertion junction: CLIP2.070196_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.070196
Chromosome:chromosome 5
Location:2506112
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g800561 (1 of 70) PF07282 - Putative transposase DNA-binding domain (OrfB_Zn_ribbon) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCACGCCAGGAACCGGATTGTTCCCTGGCGCTCTTCCCGGTCCGTCAAG
Internal bar code:GGTGGATATAAGAATGATGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2830
LEAP-Seq percent confirming:95.1807
LEAP-Seq n confirming:79
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAAGTAGGGGTCAAGGTC
Suggested primer 2:TGCGGTGAGTTGTTTGCATG