Insertion junction: CLIP2.070197_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.070197
Chromosome:chromosome 7
Location:352090
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre07.g314550 TRM8,TMG9 (1 of 1) PTHR23417//PTHR23417:SF16 - 3-DEOXY-D-MANNO-OCTULOSONIC-ACID TRANSFERASE/TRNA GUANINE-N 7 - -METHYLTRANSFERASE // TRNA (GUANINE-N(7)-)-METHYLTRANSFERASE; tRNA (guanine-N7)-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTCAACCCTAAACCCTAAAAGCCTCCCCCGCTCTGAGCGTTGCACGCT
Internal bar code:TTTCCGGTTCAATTTGTCGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:218
LEAP-Seq percent confirming:68.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:TCATGTTTCGCGTTCCCAGA
Suggested primer 2:GTCATCCATGGCTTGGGGAA