Insertion junction: CLIP2.070205_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.070205
Chromosome:chromosome 16
Location:5091890
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g685600 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGTCTACGCGCCTCCTCTTGTCATGCACGTCTATACCCTGTGAAGCTT
Internal bar code:TGGGATGTGCGGAATTCTTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1380
LEAP-Seq percent confirming:27.2727
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CATACGCGCATTGGTTGGAG
Suggested primer 2:ATGACGCAAAGCAGGGGTTA