Insertion junction: CLIP2.070205_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.070205
Chromosome:chromosome 16
Location:5091895
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g685600 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGCCTCTGCCGTACTCCTAAGCGGGGTGCGGGGGTGCGGGCAAATCCT
Internal bar code:TGGGATGTGCGGAATTCTTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:921
LEAP-Seq percent confirming:69.4444
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:ATGACGCAAAGCAGGGGTTA
Suggested primer 2:CATACGCGCATTGGTTGGAG