Insertion junction: CLIP2.070206_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.070206
Chromosome:chromosome 17
Location:3549360
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g724800 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGGCATAGCCGATAAAGGAGGGATACCACACCAAACTGTATGCATAAC
Internal bar code:CTATAGCTTGGGGGCTGTAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4977
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTCACCTTGAGCTCAACT
Suggested primer 2:GCCACACCTGCCGAAATTTT