Insertion junction: CLIP2.070211_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.070211
Chromosome:chromosome 13
Location:96917
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g562475 (1 of 1) PTHR10585//PTHR10585:SF10 - ER LUMEN PROTEIN RETAINING RECEPTOR // ER LUMEN PROTEIN RETAINING RECEPTOR FAMILY PROTEIN-RELATED 5'UTR
Cre13.g562501 SELD,SELD1 (1 of 1) 2.7.9.3 - Selenide, water dikinase / Selenophosphate synthetase; Selenophosphate synthetase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATATTATACATTAAGTTAGCAGGTTTACTAAGCTACTTGAAAATTAAGT
Internal bar code:TCAGGTTAATCGAAGGTACCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1875
LEAP-Seq percent confirming:91.8367
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGGAAGTGACAGTGGCTG
Suggested primer 2:TATACACCCCCTCGAACCGT