Insertion junction: CLIP2.070212_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.070212
Chromosome:chromosome 17
Location:2578856
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g716200 SUMO89B,SUM6 Similar to Small ubiquitin-like modifier; (1 of 4) PF03171//PF11976 - 2OG-Fe(II) oxygenase superfamily (2OG-FeII_Oxy) // Ubiquitin-2 like Rad60 SUMO-like (Rad60-SLD) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCCGGCACCAGCGCCGCTTTGCCATGGGTGCGCTGTGGCATATGGTAC
Internal bar code:AACGAGCGCAGCTTTGCTTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:218
LEAP-Seq percent confirming:4.16667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTCGGTCCTGATTAGTCG
Suggested primer 2:TGCAGTAAGCCTGACGTCTG