Insertion junction: CLIP2.070217_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.070217
Chromosome:chromosome 3
Location:9079567
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g201776 (1 of 1) IPR006575//IPR016135 - RWD domain // Ubiquitin-conjugating enzyme/RWD-like 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAGCAATCACTTTGCAACGTCAAGGCATGTTTGCGCGGTGACGTGCTG
Internal bar code:CGTTTGGAGTCCGCCTAAATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:490
LEAP-Seq percent confirming:6.66667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TAGGAAGTCGAGTGCGGGTA
Suggested primer 2:ATCACCCCTCTCCCCACTAC