Insertion junction: CLIP2.070217_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.070217
Chromosome:chromosome 3
Location:9079567
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g201776 (1 of 1) IPR006575//IPR016135 - RWD domain // Ubiquitin-conjugating enzyme/RWD-like 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTGGGAATACTCTGCACACTAGGGGACCACGCCAACCTGCCCCTTACC
Internal bar code:GGAAAGGCGTCAATTATGCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:759
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:ATCACCCCTCTCCCCACTAC
Suggested primer 2:TAGGAAGTCGAGTGCGGGTA