Insertion junction: CLIP2.070218_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.070218
Chromosome:chromosome 9
Location:2613231
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g392250 OTU5 (1 of 2) IPR000104//IPR003323 - Antifreeze protein, type I // OTU domain; OTU-like cysteine protease 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTTAATGAACTGCCCTCCCTTCACCCGCATCAAGAAGGGCTGCATGGC
Internal bar code:TAATGTAATGATGTCGGGAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2332
LEAP-Seq percent confirming:98.6111
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:AGATAGACATTGCGCGCGTA
Suggested primer 2:CTGTTGACTGGTGTGACGGT