Insertion junction: CLIP2.070223_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.070223
Chromosome:chromosome 7
Location:2480414
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g329400 SMM26 (1 of 89) 3.6.4.13 - RNA helicase; S-adenosyl-L-methionine-dependent methyltransferase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAAATGTCACCTCGATGCCGCATGAGTAGCTGTATTGCGCATGTATCAA
Internal bar code:GCACCTGTAAGGGGGCGGTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2269
LEAP-Seq percent confirming:93.9024
LEAP-Seq n confirming:77
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCTAACATGAACCCGACA
Suggested primer 2:AGTACGGTGCCAGTGAAGTG