Insertion junction: CLIP2.070234_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.070234
Chromosome:chromosome 7
Location:3835931
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre07.g338700 (1 of 4) PF04676 - Protein similar to CwfJ C-terminus 2 (CwfJ_C_2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCGAGGCGGCGGGGTGAGGGGCAGGTTGAGCAGCGAAATGGCAGCATG
Internal bar code:TTCCTCTAGTGTATTGTATGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:73
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCCCCGCTGGTTTAGTTT
Suggested primer 2:GTGGCCTTCAGTCTCGTTCA