Insertion junction: CLIP2.070235_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.070235
Chromosome:chromosome 17
Location:774515
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre17.g701250 FLA12,PF8,CCDC39,FAP59 Flagellar Associated Protein 59; (1 of 1) PTHR18962//PTHR18962:SF0 - FAMILY NOT NAMED // COILED-COIL DOMAIN-CONTAINING PROTEIN 39 3'UTR
Cre17.g701300 (1 of 1) K17491 - protein phosphatase 4 regulatory subunit 3 (SMEK, PPP4R3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACATAACCAAATATGAAGACTGGCGAGTTGGGCGGCACAGGTGCATG
Internal bar code:ACACGGGCTTACAGGGCCTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:679
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTGCAGCTTGGGTAGATT
Suggested primer 2:TGCACACGCTCTTCCAGTAG