Insertion junction: CLIP2.070242_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.070242
Chromosome:chromosome 8
Location:2452848
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g372100 HSP70A Heat shock protein 70A; (1 of 1) K03283 - heat shock 70kDa protein 1/8 (HSPA1_8) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGGGTGCGGCCTTAGGGGAGAGGCGTGCAGGCAGGTGCAAGTTCCAAA
Internal bar code:GCCATTGACCAACTTCTAGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2688
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:75
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCATGTAAAGTGATGCGG
Suggested primer 2:GCTGTGCGTTGTGTGTGAAT