Insertion junction: CLIP2.070259_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.070259
Chromosome:chromosome 12
Location:2680849
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g505200 HEL51 (1 of 1) K14777 - ATP-dependent RNA helicase DDX47/RRP3 [EC:3.6.4.13] (DDX47, RRP3); DEAD/DEAH box helicase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAGAGTTACTTGCGCACGGCCTGAGTACCAGCCACACGGTTCACGGTT
Internal bar code:AAACGAGGCTCTTGCTCTACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1469
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GCATTTGTTTGCGGTCCCTT
Suggested primer 2:GAGATGTATGGGAGCACCGG