Insertion junction: CLIP2.070261_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.070261
Chromosome:chromosome 1
Location:8003204
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g057061 (1 of 1) PF08167 - rRNA processing/ribosome biogenesis (RIX1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTGTTACCTGTAATTGTACTTTCACGGAAGCTCTTACAATATCGGTAT
Internal bar code:ATATCTTTTATGGTAATTGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:786
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GTCTCCTCCCCTTCAAGTGC
Suggested primer 2:CCTCCTGGCTACCCAAACAG