Insertion junction: CLIP2.070262_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.070262
Chromosome:chromosome 8
Location:277226
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g358567 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAGCCCAGACCACGTATCAGCTTTCCGCCTGCCTGCAATGTAGATCTAA
Internal bar code:TGTAAAGAAAATGTTGTCTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:699
LEAP-Seq percent confirming:3.7037
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:ACCACCCCAAACTGAAGCAA
Suggested primer 2:GATTGGGATCCGTGTGGGTT