Insertion junction: CLIP2.070280_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.070280
Chromosome:chromosome 16
Location:1458972
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g652650 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAGTTGCGGTGGTGCCGTGTGTCGCGTGTGTGAACAGAAATGTGAACTT
Internal bar code:GAGTGGAACGCTTGCGGCGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1362
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TAACAAACTGACTCGCGGCT
Suggested primer 2:TGGCTGTCTACTCCTACCCC