Insertion junction: CLIP2.070284_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.070284
Chromosome:contig 52
Location:12674
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre52.g802240 (1 of 3) PF09763 - Exocyst complex component Sec3 (Sec3_C) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGATTCAACAACTCCCTCCTCCTTGAACGACTACCCCTCCATTCCTCA
Internal bar code:CCTAAAGGGTTAAAGTCGAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:156
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTATGAGGGTGTGGGG
Suggested primer 2:AACGTCGTGCGGTATGAGTT