Insertion junction: CLIP2.070286_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.070286
Chromosome:chromosome 6
Location:5307745
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g284700 AAT2 Alanine aminotransferase; (1 of 1) K00814 - alanine transaminase (GPT, ALT) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGCAGCAGGGGATCTCCTGGCCATCAGTGCGCGGGGGCTGGCGGTCCT
Internal bar code:TAGGCTAGAGAAGGTAGAGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1605
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TCTCCAATCCCATCCCCCAT
Suggested primer 2:ATGGCATGCGCACTTCTTTG