Insertion junction: CLIP2.070289_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.070289
Chromosome:chromosome 12
Location:411414
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g495250 FAL15,FAP31 TPR-Repeat Flagellar Associated Protein 31; (1 of 14) PF13424 - Tetratricopeptide repeat (TPR_12) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAAGAAATGCTACACTCCATGCCCGCCTGGCCGCTCGCAGACAAGCCAT
Internal bar code:CGAGGGGCTGTACTAGCCATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1346
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCCTTTCCAGTGATGGAC
Suggested primer 2:TGGATGTCGGTCAGGTTGTG