Insertion junction: CLIP2.070290_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.070290
Chromosome:chromosome 17
Location:5566178
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g739600 (1 of 1) PF03988 - Repeat of Unknown Function (DUF347) (DUF347) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGAAACGATCACTGCAATCTGGTAGGTGTCCAGTAAGCAAGGTTCGTTG
Internal bar code:ATACGTAGGTGTGATCTATACC

Confirmation - LEAP-Seq

LEAP-Seq distance:1271
LEAP-Seq percent confirming:32.7586
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:39
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGATGCAGTCCACTTCCT
Suggested primer 2:TCAGCTTCATTCACGCAGGT