Insertion junction: CLIP2.070291_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.070291
Chromosome:chromosome 17
Location:1967371
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g710200 IAD1 Indoleamine 2%252C3-dioxygenase; (1 of 1) 1.13.11.11 - Tryptophan 2,3-dioxygenase / Tryptophanase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACTTCTCAGAGCTCTGTGGCGCTGCTTGCAGACTTACGAACGCTTAGCA
Internal bar code:AGTGGTTTTTTACTTAGGGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1024
LEAP-Seq percent confirming:86.9565
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGTTGCTAATGCTGCTAC
Suggested primer 2:GGGTGACGTTGTGCTAAGGA