Insertion junction: CLIP2.070292_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.070292
Chromosome:chromosome 9
Location:2286069
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394700 RNZ1 (1 of 6) 3.1.26.11 - Ribonuclease Z / tRNase Z; Ribonuclease Z 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCCACCGCCTCCTCCACGAACCACGGTTCTGGCCCTTTGTGCGAAGTC
Internal bar code:AATCTGGTGCTCGACATCTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:446
LEAP-Seq percent confirming:42.8571
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTTGTATGCGGCCTAGG
Suggested primer 2:CACCTTCCAAGCGGTGTAGT