Insertion junction: CLIP2.070296_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.070296
Chromosome:chromosome 11
Location:1879214
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467792 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGAACATGGCAAGGGGCAGGAAAGCGTAGTCCCGATGTGTGTGGCTCC
Internal bar code:TTTAGCGCATTACCCTGCGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3158
LEAP-Seq percent confirming:40.404
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:59
LEAP-Seq n unique pos:99

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTTGCATTACGCTAGTGC
Suggested primer 2:GACTCTGACGGCTGGACAAA