Insertion junction: CLIP2.070300_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.070300
Chromosome:chromosome 14
Location:3549682
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre14.g630811 (1 of 6) 3.4.19.12//3.4.22.69 - Ubiquitinyl hydrolase 1 / Ubiquitin thiolesterase // SARS coronavirus main proteinase / Severe acute respiratory syndrome coronavirus main protease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGATGTGCGCCATGTTGATGGACACCCCGCGGTTTAGGAGCATTTGGG
Internal bar code:TGGAGGATATGCCCGTGTTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:191
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GATGGAACCAACACACACGC
Suggested primer 2:GTCCCTAAACTCTGTGGCCC