Insertion junction: CLIP2.070301_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.070301
Chromosome:chromosome 6
Location:5000605
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g281600 LCI23 Low-CO2-inducible protein 23 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGAAACCCCTCCGGCTCGCCGATTGCTGCCGCGGAGTCCATCATTAGC
Internal bar code:GAGGGAGGAAATGCGGGGGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1802
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGGATTAGCAGCACAGCA
Suggested primer 2:GTGCTGGGTTTCCGTGTTTC