Insertion junction: CLIP2.070311_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.070311
Chromosome:chromosome 6
Location:3322352
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g277600 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTTTTGTGTGTGGCACCGTATCGTAGACAGAGAGCAAGAGGCATCAGAG
Internal bar code:ACTGAACCAGTGTAAGACGACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1972
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:AGACAAGGTTCTCCGGCTTG
Suggested primer 2:CTTTCACGCTGACCTGACCT