Insertion junction: CLIP2.070311_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.070311
Chromosome:chromosome 6
Location:3322355
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g277600 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACGCTGCAACGCTGCGCAACTCGAGACGCACTCATACCGCCGTGCCC
Internal bar code:GGTACAGTGGGGCGTCCAAAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3463
LEAP-Seq percent confirming:99.0
LEAP-Seq n confirming:99
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:100

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTCACGCTGACCTGACCT
Suggested primer 2:AGACAAGGTTCTCCGGCTTG