Insertion junction: CLIP2.070314_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.070314
Chromosome:chromosome 6
Location:6347973
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g293100 (1 of 2) PTHR19957:SF124 - SYNTAXIN-8B-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGACATTGTGGCGGCCGAACCGCAACGCTTCCACGTCTCCCCCGCGGAGG
Internal bar code:CTTTTTTATGTTAGACTTAAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2348
LEAP-Seq percent confirming:96.4286
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TACGGCTCTGGGGAGATGAA
Suggested primer 2:GGACATCGACGAGCAGGTAG