Insertion junction: CLIP2.070316_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.070316
Chromosome:chromosome 6
Location:2932125
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g273250 GPA2,GPAT2 Glycerol-3-phosphate acyltransferase; (1 of 1) K13506 - glycerol-3-phosphate O-acyltransferase 3/4 (GPAT3_4, AGPAT9, AGPAT6) 3'UTR
Cre06.g273300 TST1 (1 of 2) 6.1.1.3 - Threonine--tRNA ligase / Threonyl-tRNA synthetase; Threonyl-tRNA synthetase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCGAAGGATAGGCGCGCGCGAGTGCTGTACAGGGGTGCGTGCTGGTGA
Internal bar code:GGCTAAGGTGCCCAAGATATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2903
LEAP-Seq percent confirming:96.5909
LEAP-Seq n confirming:85
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:88

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGGGTCGGATGGGAATCT
Suggested primer 2:ATCAGGAGGACGAGGACGAA